YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 3.9227E-5 5 101 3 6292
cytosolic part 6.9145E-5 5 122 3 6292
ribosomal subunit 2.3185E-4 5 183 3 6292
cytosol 8.504E-4 5 284 3 6292
cytosolic large ribosomal subunit 8.7794E-4 5 60 2 6292
ribosome 9.043E-4 5 290 3 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
large ribosomal subunit 2.9264E-3 5 110 2 6292
ribonucleoprotein complex 4.783E-3 5 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal subunit assembly 6.2441E-6 5 55 3 6292
ribosome assembly 9.8949E-6 5 64 3 6292
organelle assembly 1.2428E-5 5 69 3 6292
ribonucleoprotein complex assembly 2.9624E-5 5 92 3 6292
translation 5.9837E-5 5 376 4 6292
cellular macromolecular complex assembly 2.281E-4 5 182 3 6292
ribosomal large subunit assembly 4.092E-4 5 41 2 6292
cellular macromolecular complex subunit organization 6.4832E-4 5 259 3 6292
macromolecular complex assembly 8.2425E-4 5 281 3 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
ribosome biogenesis 1.5173E-3 5 346 3 6292
macromolecular complex subunit organization 1.6626E-3 5 357 3 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
cellular component assembly 2.072E-3 5 385 3 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
gene expression 7.2106E-3 5 1283 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 1.3109E-5 5 666 5 6292
RNA binding 5.4355E-5 5 367 4 6292
rRNA binding 6.0363E-5 5 16 2 6292
structural constituent of ribosome 3.5873E-4 5 212 3 6292
binding 3.6564E-4 5 1294 5 6292
7S RNA binding 7.9466E-4 5 1 1 6292
structural molecule activity 1.4293E-3 5 339 3 6292
5S rRNA binding 1.5888E-3 5 2 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle