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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex 5.3258E-7 3 52 3 6292
nuclear pore 5.3258E-7 3 52 3 6292
nuclear envelope 3.1176E-5 3 199 3 6292
integral to membrane 6.5817E-5 3 255 3 6292
intrinsic to membrane 7.141E-5 3 262 3 6292
endomembrane system 2.5131E-4 3 398 3 6292
envelope 5.142E-4 3 505 3 6292
organelle envelope 5.142E-4 3 505 3 6292
membrane part 1.16E-3 3 662 3 6292
nuclear part 5.3751E-3 3 1103 3 6292
protein complex 5.8881E-3 3 1137 3 6292
membrane 6.8885E-3 3 1198 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA export from nucleus 7.0488E-8 3 27 3 6292
rRNA transport 7.0488E-8 3 27 3 6292
nuclear pore organization 7.8947E-8 3 28 3 6292
nucleus organization 6.6801E-7 3 56 3 6292
mRNA export from nucleus 1.2077E-6 3 68 3 6292
mRNA transport 1.2077E-6 3 68 3 6292
RNA export from nucleus 1.9799E-6 3 80 3 6292
RNA transport 2.0561E-6 3 81 3 6292
nucleic acid transport 2.0561E-6 3 81 3 6292
establishment of RNA localization 2.0561E-6 3 81 3 6292
RNA localization 3.0263E-6 3 92 3 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 3.4432E-6 3 96 3 6292
nuclear export 4.2619E-6 3 103 3 6292
nuclear transport 8.6215E-6 3 130 3 6292
nucleocytoplasmic transport 8.6215E-6 3 130 3 6292
ribosomal protein import into nucleus 3.8264E-5 3 23 2 6292
snRNP protein import into nucleus 3.8264E-5 3 23 2 6292
snRNA export from nucleus 3.8264E-5 3 23 2 6292
NLS-bearing substrate import into nucleus 3.8264E-5 3 23 2 6292
snRNA transport 3.8264E-5 3 23 2 6292
mRNA-binding (hnRNP) protein import into nucleus 4.5363E-5 3 25 2 6292
establishment of ribosome localization 4.9138E-5 3 26 2 6292
ribosome localization 4.9138E-5 3 26 2 6292
ribosomal subunit export from nucleus 4.9138E-5 3 26 2 6292
tRNA export from nucleus 5.7139E-5 3 28 2 6292
tRNA transport 5.7139E-5 3 28 2 6292
cellular macromolecular complex subunit organization 6.8975E-5 3 259 3 6292
protein export from nucleus 7.4945E-5 3 32 2 6292
ribosome biogenesis 1.6493E-4 3 346 3 6292
nuclear import 1.7015E-4 3 48 2 6292
protein localization in nucleus 1.7015E-4 3 48 2 6292
protein import into nucleus 1.7015E-4 3 48 2 6292
macromolecular complex subunit organization 1.8121E-4 3 357 3 6292
ribonucleoprotein complex biogenesis 2.0843E-4 3 374 3 6292
establishment of organelle localization 2.2383E-4 3 55 2 6292
macromolecule localization 2.4942E-4 3 397 3 6292
organelle localization 5.3638E-4 3 85 2 6292
intracellular transport 6.7555E-4 3 553 3 6292
establishment of localization in cell 8.589E-4 3 599 3 6292
protein import 8.6599E-4 3 108 2 6292
cellular localization 1.0628E-3 3 643 3 6292
cellular component biogenesis 1.3367E-3 3 694 3 6292
protein localization in organelle 1.6453E-3 3 149 2 6292
transport 3.9684E-3 3 997 3 6292
protein targeting 4.0648E-3 3 235 2 6292
establishment of localization 4.1014E-3 3 1008 3 6292
ribosomal large subunit export from nucleus 4.2857E-3 3 9 1 6292
localization 4.7701E-3 3 1060 3 6292
intracellular protein transport 4.7773E-3 3 255 2 6292
protein transport 5.3092E-3 3 269 2 6292
establishment of protein localization 5.3875E-3 3 271 2 6292
cellular protein localization 5.5058E-3 3 274 2 6292
organelle organization 5.734E-3 3 1127 3 6292
cellular macromolecule localization 5.9093E-3 3 284 2 6292
protein localization 6.714E-3 3 303 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural molecule activity 1.5509E-4 3 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle