From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
FACT complex | 1.5158E-7 | 3 | 2 | 2 | 6292 |
alpha DNA polymerase:primase complex | 3.1815E-6 | 3 | 7 | 2 | 6292 |
nuclear replisome | 2.3152E-5 | 3 | 18 | 2 | 6292 |
replisome | 2.3152E-5 | 3 | 18 | 2 | 6292 |
nuclear replication fork | 2.8745E-5 | 3 | 20 | 2 | 6292 |
transcription elongation factor complex | 3.8264E-5 | 3 | 23 | 2 | 6292 |
replication fork | 1.2996E-4 | 3 | 42 | 2 | 6292 |
protein-DNA complex | 2.4051E-4 | 3 | 57 | 2 | 6292 |
nuclear chromatin | 3.9536E-4 | 3 | 73 | 2 | 6292 |
chromatin | 4.4E-4 | 3 | 77 | 2 | 6292 |
nuclear chromosome part | 2.6674E-3 | 3 | 190 | 2 | 6292 |
nuclear chromosome | 3.8286E-3 | 3 | 228 | 2 | 6292 |
chromosomal part | 4.1335E-3 | 3 | 237 | 2 | 6292 |
nucleoplasm part | 4.414E-3 | 3 | 245 | 2 | 6292 |
nucleoplasm | 5.1161E-3 | 3 | 264 | 2 | 6292 |
chromosome | 5.5058E-3 | 3 | 274 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
RNA elongation from RNA polymerase II promoter | 1.1188E-4 | 3 | 39 | 2 | 6292 |
RNA elongation | 1.4938E-4 | 3 | 45 | 2 | 6292 |
transcription initiation from RNA polymerase II promoter | 1.6308E-4 | 3 | 47 | 2 | 6292 |
transcription initiation | 2.4908E-4 | 3 | 58 | 2 | 6292 |
protein complex biogenesis | 1.7798E-3 | 3 | 155 | 2 | 6292 |
protein complex assembly | 1.7798E-3 | 3 | 155 | 2 | 6292 |
macromolecular complex assembly | 5.7868E-3 | 3 | 281 | 2 | 6292 |
transcription from RNA polymerase II promoter | 8.1809E-3 | 3 | 335 | 2 | 6292 |
macromolecular complex subunit organization | 9.2699E-3 | 3 | 357 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
protein transmembrane transporter activity | 4.2857E-3 | 3 | 9 | 1 | 6292 |
macromolecule transmembrane transporter activity | 4.2857E-3 | 3 | 9 | 1 | 6292 |
RNA polymerase II transcription elongation factor activity | 6.1865E-3 | 3 | 13 | 1 | 6292 |
transcription elongation regulator activity | 9.0332E-3 | 3 | 19 | 1 | 6292 |