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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
intracellular non-membrane-bounded organelle 8.1528E-5 5 959 5 6292
nucleolus 3.5374E-4 5 211 3 6292
cytosolic large ribosomal subunit 8.7794E-4 5 60 2 6292
cytosolic ribosome 2.4722E-3 5 101 2 6292
large ribosomal subunit 2.9264E-3 5 110 2 6292
nuclear lumen 3.3223E-3 5 453 3 6292
cytosolic part 3.5891E-3 5 122 2 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292
ribosomal subunit 7.9403E-3 5 183 2 6292
organelle lumen 9.7686E-3 5 660 3 6292
intracellular organelle lumen 9.7686E-3 5 660 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit assembly 4.092E-4 5 41 2 6292
ribosomal subunit assembly 7.3776E-4 5 55 2 6292
ribosome assembly 9.9868E-4 5 64 2 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
organelle assembly 1.1603E-3 5 69 2 6292
ribosome biogenesis 1.5173E-3 5 346 3 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
ribonucleoprotein complex assembly 2.0552E-3 5 92 2 6292
cellular macromolecular complex assembly 7.856E-3 5 182 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA binding 5.4355E-5 5 367 4 6292
nucleic acid binding 5.7016E-4 5 666 4 6292
7S RNA binding 7.9466E-4 5 1 1 6292
5S rRNA binding 1.5888E-3 5 2 1 6292
binding 7.4489E-3 5 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle