YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
RPL10
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • structural constituent of ribosome
  • RPL15A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL20A
  • translation
  • structural constituent of ribosome
  • RPL20B
  • ribosome biogenesis
  • translation
  • structural constituent of ribosome
  • RPL6A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPS11A, RPS11B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS1A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS3
  • preribosome, small subunit precursor
  • response to DNA damage stimulus
  • translation
  • structural constituent of ribosome
  • RPS8B, RPS8A
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • 90S preribosome
  • ribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • translation
  • structural constituent of ribosome
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    cytosolic ribosome 1.1908E-9 9 101 6 6292
    cytosolic part 3.7649E-9 9 122 6 6292
    ribosomal subunit 4.3602E-8 9 183 6 6292
    preribosome 8.7868E-8 9 34 4 6292
    cytosol 6.013E-7 9 284 6 6292
    ribosome 6.8068E-7 9 290 6 6292
    ribonucleoprotein complex 7.2713E-7 9 514 7 6292
    90S preribosome 1.3628E-6 9 17 3 6292
    cytosolic small ribosomal subunit 1.6654E-5 9 38 3 6292
    cytosolic large ribosomal subunit 6.6496E-5 9 60 3 6292
    small ribosomal subunit 1.1973E-4 9 73 3 6292
    large ribosomal subunit 4.0454E-4 9 110 3 6292
    non-membrane-bounded organelle 6.8534E-4 9 959 6 6292
    intracellular non-membrane-bounded organelle 6.8534E-4 9 959 6 6292
    macromolecular complex 1.7084E-3 9 1635 7 6292
    preribosome, small subunit precursor 8.5551E-3 9 6 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 8.8752E-12 9 376 9 6292
    cellular protein metabolic process 1.1963E-7 9 1074 9 6292
    protein metabolic process 1.9861E-7 9 1136 9 6292
    cellular macromolecule biosynthetic process 2.9528E-7 9 1187 9 6292
    macromolecule biosynthetic process 2.9981E-7 9 1189 9 6292
    gene expression 5.9596E-7 9 1283 9 6292
    cellular biosynthetic process 3.6225E-6 9 1567 9 6292
    biosynthetic process 4.4215E-6 9 1602 9 6292
    ribosomal subunit assembly 5.1163E-5 9 55 3 6292
    ribosome biogenesis 5.125E-5 9 346 5 6292
    ribonucleoprotein complex biogenesis 7.4625E-5 9 374 5 6292
    ribosome assembly 8.0728E-5 9 64 3 6292
    organelle assembly 1.0115E-4 9 69 3 6292
    cellular macromolecule metabolic process 1.0877E-4 9 2285 9 6292
    macromolecule metabolic process 1.3953E-4 9 2349 9 6292
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.4073E-4 9 13 2 6292
    ribonucleoprotein complex assembly 2.3847E-4 9 92 3 6292
    primary metabolic process 9.2081E-4 9 2896 9 6292
    cellular component biogenesis 1.3868E-3 9 694 5 6292
    cellular metabolic process 1.3966E-3 9 3033 9 6292
    ribosomal large subunit assembly 1.449E-3 9 41 2 6292
    cellular macromolecular complex assembly 1.7584E-3 9 182 3 6292
    metabolic process 2.004E-3 9 3157 9 6292
    regulation of translation 2.7869E-3 9 57 2 6292
    maturation of SSU-rRNA 2.9832E-3 9 59 2 6292
    posttranscriptional regulation of gene expression 3.186E-3 9 61 2 6292
    ribosomal large subunit biogenesis 3.6105E-3 9 65 2 6292
    regulation of cellular protein metabolic process 3.9454E-3 9 68 2 6292
    regulation of protein metabolic process 4.6571E-3 9 74 2 6292
    cellular macromolecular complex subunit organization 4.8149E-3 9 259 3 6292
    macromolecular complex assembly 6.0565E-3 9 281 3 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 4.7387E-14 9 212 9 6292
    structural molecule activity 3.4568E-12 9 339 9 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle