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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

preribosome, small subunit precursor 4.5436E-6 4 6 2 6292
preribosome 1.6892E-4 4 34 2 6292
ribonucleoprotein complex 2.0368E-3 4 514 3 6292
late endosome membrane 3.1756E-3 4 5 1 6292
nucleolus 6.4227E-3 4 211 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 8.9951E-6 4 346 4 6292
ribonucleoprotein complex biogenesis 1.2296E-5 4 374 4 6292
rRNA processing 3.2416E-5 4 128 3 6292
rRNA metabolic process 3.9765E-5 4 137 3 6292
cellular component biogenesis 1.4687E-4 4 694 4 6292
ncRNA processing 1.5347E-4 4 215 3 6292
ncRNA metabolic process 2.6137E-4 4 257 3 6292
RNA processing 8.3529E-4 4 380 3 6292
ribosomal small subunit export from nucleus 4.4437E-3 4 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein binding 4.4437E-3 4 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle