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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 2.8931E-7 6 514 6 6292
90S preribosome 3.261E-7 6 17 3 6292
preribosome 2.8523E-6 6 34 3 6292
cytosolic small ribosomal subunit 4.0152E-6 6 38 3 6292
small nucleolar ribonucleoprotein complex 2.8041E-5 6 72 3 6292
small ribosomal subunit 2.9233E-5 6 73 3 6292
cytosolic ribosome 7.7539E-5 6 101 3 6292
cytosolic part 1.3633E-4 6 122 3 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
ribosomal subunit 4.5377E-4 6 183 3 6292
cytosol 1.644E-3 6 284 3 6292
ribosome 1.747E-3 6 290 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 4.3855E-8 6 376 6 6292
regulation of translation 8.9597E-8 6 57 4 6292
posttranscriptional regulation of gene expression 1.1825E-7 6 61 4 6292
regulation of cellular protein metabolic process 1.842E-7 6 68 4 6292
regulation of protein metabolic process 2.5985E-7 6 74 4 6292
cellular protein metabolic process 2.4449E-5 6 1074 6 6292
regulation of translational fidelity 2.7204E-5 6 9 2 6292
protein metabolic process 3.4263E-5 6 1136 6 6292
cellular macromolecule biosynthetic process 4.4618E-5 6 1187 6 6292
macromolecule biosynthetic process 4.5072E-5 6 1189 6 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.8841E-5 6 13 2 6292
regulation of translational elongation 5.8841E-5 6 13 2 6292
gene expression 7.1216E-5 6 1283 6 6292
cellular biosynthetic process 2.3689E-4 6 1567 6 6292
biosynthetic process 2.7052E-4 6 1602 6 6292
translational elongation 3.042E-4 6 29 2 6292
regulation of gene expression 3.3024E-4 6 445 4 6292
regulation of macromolecule biosynthetic process 3.6316E-4 6 456 4 6292
regulation of cellular biosynthetic process 4.1527E-4 6 472 4 6292
regulation of biosynthetic process 4.187E-4 6 473 4 6292
regulation of macromolecule metabolic process 4.7266E-4 6 488 4 6292
regulation of primary metabolic process 5.7801E-4 6 514 4 6292
regulation of cellular metabolic process 6.7976E-4 6 536 4 6292
regulation of metabolic process 7.3526E-4 6 547 4 6292
maturation of SSU-rRNA 1.2657E-3 6 59 2 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
regulation of cellular process 3.0881E-3 6 796 4 6292
regulation of biological process 3.5191E-3 6 824 4 6292
rRNA processing 5.8384E-3 6 128 2 6292
rRNA metabolic process 6.6661E-3 6 137 2 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.3656E-9 6 212 6 6292
structural molecule activity 2.3452E-8 6 339 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle