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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

90S preribosome 6.8389E-5 5 17 2 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
preribosome 2.8058E-4 5 34 2 6292
cytosolic small ribosomal subunit 3.5115E-4 5 38 2 6292
small nucleolar ribonucleoprotein complex 1.263E-3 5 72 2 6292
small ribosomal subunit 1.2981E-3 5 73 2 6292
cytosolic ribosome 2.4722E-3 5 101 2 6292
cytosolic part 3.5891E-3 5 122 2 6292
ribosomal subunit 7.9403E-3 5 183 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 6.9607E-6 5 57 3 6292
posttranscriptional regulation of gene expression 8.5535E-6 5 61 3 6292
regulation of cellular protein metabolic process 1.1891E-5 5 68 3 6292
regulation of protein metabolic process 1.5358E-5 5 74 3 6292
regulation of translational fidelity 1.8149E-5 5 9 2 6292
regulation of translational elongation 3.9273E-5 5 13 2 6292
translation 5.9837E-5 5 376 4 6292
translational elongation 2.0338E-4 5 29 2 6292
regulation of gene expression 3.1553E-3 5 445 3 6292
regulation of macromolecule biosynthetic process 3.3863E-3 5 456 3 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
regulation of cellular biosynthetic process 3.7412E-3 5 472 3 6292
regulation of biosynthetic process 3.7641E-3 5 473 3 6292
regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
protein metabolic process 4.528E-3 5 1136 4 6292
regulation of primary metabolic process 4.783E-3 5 514 3 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
poly(A)+ mRNA export from nucleus 5.552E-3 5 7 1 6292
regulation of metabolic process 5.7186E-3 5 547 3 6292
biological regulation 5.8209E-3 5 1213 4 6292
regulation of biological quality 5.8393E-3 5 551 3 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
gene expression 7.2106E-3 5 1283 4 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 6.1033E-6 5 212 4 6292
structural molecule activity 3.9664E-5 5 339 4 6292
telomeric DNA binding 9.5026E-3 5 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle