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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 11 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
ARX1
  • cytoplasm
  • nucleoplasm
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • molecular_function
  • CIC1
  • proteasome complex
  • nucleolus
  • protein catabolic process
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • protein binding, bridging
  • DRS1
  • nuclear outer membrane
  • nucleolus
  • ribosome biogenesis
  • ribosomal large subunit assembly
  • ATP-dependent RNA helicase activity
  • MDN1
  • nucleus
  • mitochondrion
  • nucleoplasm
  • protein complex assembly
  • rRNA processing
  • ribosomal large subunit assembly
  • ATPase activity
  • NOG1
  • nuclear outer membrane
  • nucleolus
  • preribosome, large subunit precursor
  • ribosomal subunit export from nucleus
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • GTP binding
  • NOP15
  • nucleus
  • nucleolus
  • cytokinesis, actomyosin contractile ring assembly
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • ribosome assembly
  • molecular_function
  • NOP7
  • nucleus
  • nucleolus
  • cell proliferation
  • maturation of SSU-rRNA
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • cell cycle
  • molecular_function
  • NUG1
  • nucleus
  • nucleolus
  • ribosome biogenesis
  • rRNA processing
  • GTPase activity
  • RIX1
  • nucleus
  • nuclear outer membrane
  • nucleoplasm
  • ribosomal subunit export from nucleus
  • ribosome biogenesis
  • ribosomal large subunit assembly
  • molecular_function
  • RLP7
  • nucleolus
  • ribosomal large subunit biogenesis
  • ribosome biogenesis
  • processing of 27S pre-rRNA
  • rRNA binding
  • SDA1
  • nucleus
  • ribosome biogenesis
  • traversing start control point of mitotic cell cycle
  • ribosome assembly
  • actin cytoskeleton organization
  • molecular_function
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    nuclear lumen 3.5105E-11 11 453 10 6292
    organelle lumen 1.5115E-9 11 660 10 6292
    intracellular organelle lumen 1.5115E-9 11 660 10 6292
    membrane-enclosed lumen 2.7156E-9 11 700 10 6292
    nucleolus 1.2727E-8 11 211 7 6292
    nuclear part 2.4537E-7 11 1103 10 6292
    nucleus 4.1084E-6 11 2041 11 6292
    organelle part 2.8711E-4 11 2282 10 6292
    intracellular organelle part 2.8711E-4 11 2282 10 6292
    non-membrane-bounded organelle 3.5121E-4 11 959 7 6292
    intracellular non-membrane-bounded organelle 3.5121E-4 11 959 7 6292
    nuclear outer membrane 3.7586E-4 11 86 3 6292
    nuclear membrane 5.3581E-4 11 97 3 6292
    outer membrane 3.1067E-3 11 178 3 6292
    organelle outer membrane 3.1067E-3 11 178 3 6292
    membrane-bounded organelle 3.5629E-3 11 3771 11 6292
    intracellular membrane-bounded organelle 3.5629E-3 11 3771 11 6292
    nuclear envelope 4.2616E-3 11 199 3 6292
    nuclear membrane-endoplasmic reticulum network 6.5547E-3 11 232 3 6292
    intracellular organelle 8.2563E-3 11 4070 11 6292
    organelle 8.2787E-3 11 4071 11 6292
    nucleoplasm 9.3783E-3 11 264 3 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    ribosomal large subunit biogenesis 4.0852E-17 11 65 9 6292
    ribosome biogenesis 1.1946E-14 11 346 11 6292
    ribonucleoprotein complex biogenesis 2.846E-14 11 374 11 6292
    cellular component biogenesis 2.7383E-11 11 694 11 6292
    ribosome assembly 4.0957E-8 11 64 5 6292
    organelle assembly 6.0129E-8 11 69 5 6292
    ribonucleoprotein complex assembly 2.583E-7 11 92 5 6292
    cellular macromolecular complex assembly 7.6897E-6 11 182 5 6292
    ribosomal large subunit assembly 4.0875E-5 11 41 3 6292
    cellular macromolecular complex subunit organization 4.2853E-5 11 259 5 6292
    macromolecular complex assembly 6.3461E-5 11 281 5 6292
    ribosomal subunit assembly 9.9258E-5 11 55 3 6292
    macromolecular complex subunit organization 1.988E-4 11 357 5 6292
    cellular component assembly 2.8391E-4 11 385 5 6292
    establishment of ribosome localization 8.8271E-4 11 26 2 6292
    ribosome localization 8.8271E-4 11 26 2 6292
    ribosomal subunit export from nucleus 8.8271E-4 11 26 2 6292
    rRNA processing 1.2042E-3 11 128 3 6292
    rRNA metabolic process 1.466E-3 11 137 3 6292
    establishment of organelle localization 3.9232E-3 11 55 2 6292
    actomyosin structure organization 5.2364E-3 11 3 1 6292
    cytokinesis, actomyosin contractile ring assembly 5.2364E-3 11 3 1 6292
    assembly of actomyosin apparatus involved in cell cycle cytokinesis 5.2364E-3 11 3 1 6292
    ncRNA processing 5.2979E-3 11 215 3 6292
    ncRNA metabolic process 8.7081E-3 11 257 3 6292
    cell proliferation 8.7135E-3 11 5 1 6292
    organelle localization 9.1655E-3 11 85 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle