YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 12 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
KRE33
  • nucleolus
  • ribosome biogenesis
  • molecular_function
  • RPL10
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • ribosomal large subunit assembly
  • translation
  • structural constituent of ribosome
  • RPL15A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL20B
  • ribosome biogenesis
  • translation
  • structural constituent of ribosome
  • RPP0
  • ribosomal large subunit assembly
  • translational elongation
  • translation
  • structural constituent of ribosome
  • RPS11A, RPS11B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS1A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS1B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS3
  • preribosome, small subunit precursor
  • response to DNA damage stimulus
  • translation
  • structural constituent of ribosome
  • RPS6A, RPS6B
  • small-subunit processome
  • nucleus
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • nucleolus
  • 90S preribosome
  • intracellular
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • rRNA processing
  • translation
  • structural constituent of ribosome
  • RPS7A
  • small nucleolar ribonucleoprotein complex
  • translation
  • structural constituent of ribosome
  • UTP22
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    preribosome 2.6145E-9 12 34 5 6292
    cytosolic ribosome 1.2596E-8 12 101 6 6292
    90S preribosome 1.782E-8 12 17 4 6292
    ribonucleoprotein complex 2.6676E-8 12 514 9 6292
    cytosolic part 3.9481E-8 12 122 6 6292
    ribosomal subunit 4.4578E-7 12 183 6 6292
    cytosolic small ribosomal subunit 5.4096E-7 12 38 4 6292
    cytosol 5.8922E-6 12 284 6 6292
    ribosome 6.6531E-6 12 290 6 6292
    small ribosomal subunit 7.696E-6 12 73 4 6292
    non-membrane-bounded organelle 7.9037E-5 12 959 8 6292
    intracellular non-membrane-bounded organelle 7.9037E-5 12 959 8 6292
    macromolecular complex 5.2917E-4 12 1635 9 6292
    cytosolic large ribosomal subunit 5.5506E-3 12 60 2 6292
    nucleolus 6.5368E-3 12 211 3 6292
    small nucleolar ribonucleoprotein complex 7.9142E-3 12 72 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 3.0688E-11 12 376 10 6292
    gene expression 2.393E-7 12 1283 11 6292
    ribosome biogenesis 8.9294E-7 12 346 7 6292
    cellular protein metabolic process 9.5815E-7 12 1074 10 6292
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.5001E-6 12 13 3 6292
    ribonucleoprotein complex biogenesis 1.5153E-6 12 374 7 6292
    protein metabolic process 1.6479E-6 12 1136 10 6292
    cellular macromolecule biosynthetic process 2.516E-6 12 1187 10 6292
    macromolecule biosynthetic process 2.5571E-6 12 1189 10 6292
    cellular biosynthetic process 3.5603E-5 12 1567 10 6292
    biosynthetic process 4.3855E-5 12 1602 10 6292
    cellular component biogenesis 9.277E-5 12 694 7 6292
    cellular macromolecule metabolic process 1.144E-4 12 2285 11 6292
    ribosomal subunit assembly 1.3153E-4 12 55 3 6292
    macromolecule metabolic process 1.5296E-4 12 2349 11 6292
    maturation of SSU-rRNA 1.6228E-4 12 59 3 6292
    ribosome assembly 2.0686E-4 12 64 3 6292
    organelle assembly 2.5874E-4 12 69 3 6292
    ribonucleoprotein complex assembly 6.0496E-4 12 92 3 6292
    primary metabolic process 1.3504E-3 12 2896 11 6292
    rRNA processing 1.5818E-3 12 128 3 6292
    rRNA metabolic process 1.9237E-3 12 137 3 6292
    cellular metabolic process 2.1697E-3 12 3033 11 6292
    ribosomal large subunit assembly 2.6238E-3 12 41 2 6292
    metabolic process 3.2647E-3 12 3157 11 6292
    cellular macromolecular complex assembly 4.3192E-3 12 182 3 6292
    ribosomal large subunit biogenesis 6.4883E-3 12 65 2 6292
    ncRNA processing 6.8876E-3 12 215 3 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 9.5227E-14 12 212 10 6292
    structural molecule activity 1.0869E-11 12 339 10 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle