From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
Complex Size: | 15 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transcription factor TFIID complex | 3.3769E-25 | 15 | 15 | 10 | 6292 |
SLIK (SAGA-like) complex | 8.9986E-25 | 15 | 16 | 10 | 6292 |
SAGA complex | 7.2349E-23 | 15 | 22 | 10 | 6292 |
SAGA-type complex | 1.2791E-22 | 15 | 23 | 10 | 6292 |
nucleoplasm part | 4.7098E-22 | 15 | 245 | 15 | 6292 |
nucleoplasm | 1.4911E-21 | 15 | 264 | 15 | 6292 |
histone acetyltransferase complex | 2.7321E-19 | 15 | 44 | 10 | 6292 |
DNA-directed RNA polymerase II, holoenzyme | 3.8866E-18 | 15 | 56 | 10 | 6292 |
nuclear lumen | 5.8229E-18 | 15 | 453 | 15 | 6292 |
transcription factor complex | 4.9851E-17 | 15 | 71 | 10 | 6292 |
organelle lumen | 1.7741E-15 | 15 | 660 | 15 | 6292 |
intracellular organelle lumen | 1.7741E-15 | 15 | 660 | 15 | 6292 |
membrane-enclosed lumen | 4.3281E-15 | 15 | 700 | 15 | 6292 |
nuclear part | 4.193E-12 | 15 | 1103 | 15 | 6292 |
protein complex | 6.6306E-12 | 15 | 1137 | 15 | 6292 |
macromolecular complex | 1.5857E-9 | 15 | 1635 | 15 | 6292 |
nucleus | 4.4738E-8 | 15 | 2041 | 15 | 6292 |
Ada2/Gcn5/Ada3 transcription activator complex | 1.0934E-7 | 15 | 5 | 3 | 6292 |
organelle part | 2.3996E-7 | 15 | 2282 | 15 | 6292 |
intracellular organelle part | 2.3996E-7 | 15 | 2282 | 15 | 6292 |
membrane-bounded organelle | 4.5726E-4 | 15 | 3771 | 15 | 6292 |
intracellular membrane-bounded organelle | 4.5726E-4 | 15 | 3771 | 15 | 6292 |
intracellular organelle | 1.4392E-3 | 15 | 4070 | 15 | 6292 |
organelle | 1.4445E-3 | 15 | 4071 | 15 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transcription regulator activity | 2.4594E-15 | 15 | 339 | 13 | 6292 |
general RNA polymerase II transcription factor activity | 3.1039E-15 | 15 | 64 | 9 | 6292 |
RNA polymerase II transcription factor activity | 2.7545E-14 | 15 | 130 | 10 | 6292 |
transcription cofactor activity | 1.0274E-4 | 15 | 40 | 3 | 6292 |
transcription factor binding | 1.2778E-4 | 15 | 43 | 3 | 6292 |
histone acetyltransferase activity | 7.0676E-4 | 15 | 17 | 2 | 6292 |
lysine N-acetyltransferase activity | 7.0676E-4 | 15 | 17 | 2 | 6292 |
transcription coactivator activity | 1.0853E-3 | 15 | 21 | 2 | 6292 |
N-acetyltransferase activity | 2.6841E-3 | 15 | 33 | 2 | 6292 |
N-acyltransferase activity | 3.5492E-3 | 15 | 38 | 2 | 6292 |
acetyltransferase activity | 6.0833E-3 | 15 | 50 | 2 | 6292 |
transcription activator activity | 8.9514E-3 | 15 | 61 | 2 | 6292 |