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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear telomeric heterochromatin 2.224E-3 2 7 1 6292
telomeric heterochromatin 2.224E-3 2 7 1 6292
nuclear heterochromatin 2.224E-3 2 7 1 6292
heterochromatin 2.224E-3 2 7 1 6292
chromatin silencing complex 2.859E-3 2 9 1 6292
telomere cap complex 3.4937E-3 2 11 1 6292
nuclear telomere cap complex 3.4937E-3 2 11 1 6292
nuclear chromosome, telomeric region 7.2981E-3 2 23 1 6292
chromosome, telomeric region 8.5646E-3 2 27 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

loss of chromatin silencing involved in replicative cell aging 2.859E-3 2 9 1 6292
progressive alteration of chromatin involved in replicative cell aging 3.1764E-3 2 10 1 6292
loss of chromatin silencing 3.1764E-3 2 10 1 6292
progressive alteration of chromatin involved in cell aging 3.4937E-3 2 11 1 6292
positive regulation of gene expression, epigenetic 3.4937E-3 2 11 1 6292
regulation of gene silencing 3.4937E-3 2 11 1 6292
negative regulation of gene silencing 3.4937E-3 2 11 1 6292
regulation of chromatin silencing 3.4937E-3 2 11 1 6292
negative regulation of chromatin silencing 3.4937E-3 2 11 1 6292
double-strand break repair via nonhomologous end joining 7.9314E-3 2 25 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of chromatin 6.3568E-4 2 2 1 6292
glutamate dehydrogenase activity 6.3568E-4 2 2 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 1.2712E-3 2 4 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors 3.811E-3 2 12 1 6292
histone binding 4.4455E-3 2 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle