YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

preribosome 4.9003E-8 8 34 4 6292
cytosolic ribosome 5.2025E-8 8 101 5 6292
cytosolic part 1.35E-7 8 122 5 6292
90S preribosome 9.1004E-7 8 17 3 6292
ribosomal subunit 1.0284E-6 8 183 5 6292
ribonucleoprotein complex 7.018E-6 8 514 6 6292
cytosol 9.0595E-6 8 284 5 6292
ribosome 1.004E-5 8 290 5 6292
cytosolic small ribosomal subunit 1.1149E-5 8 38 3 6292
small ribosomal subunit 8.0492E-5 8 73 3 6292
cytosolic large ribosomal subunit 2.4133E-3 8 60 2 6292
non-membrane-bounded organelle 3.0487E-3 8 959 5 6292
intracellular non-membrane-bounded organelle 3.0487E-3 8 959 5 6292
macromolecular complex 5.1894E-3 8 1635 6 6292
preribosome, small subunit precursor 7.6075E-3 8 6 1 6292
large ribosomal subunit 7.9172E-3 8 110 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.959E-8 8 376 7 6292
cellular protein metabolic process 2.8294E-5 8 1074 7 6292
ribosomal subunit assembly 3.4321E-5 8 55 3 6292
protein metabolic process 4.153E-5 8 1136 7 6292
ribosome assembly 5.4212E-5 8 64 3 6292
cellular macromolecule biosynthetic process 5.6045E-5 8 1187 7 6292
macromolecule biosynthetic process 5.6692E-5 8 1189 7 6292
organelle assembly 6.797E-5 8 69 3 6292
gene expression 9.518E-5 8 1283 7 6292
ribonucleoprotein complex assembly 1.6068E-4 8 92 3 6292
cellular biosynthetic process 3.6841E-4 8 1567 7 6292
biosynthetic process 4.2747E-4 8 1602 7 6292
ribosomal large subunit assembly 1.1316E-3 8 41 2 6292
cellular macromolecular complex assembly 1.1976E-3 8 182 3 6292
ribosomal large subunit biogenesis 2.8269E-3 8 65 2 6292
cellular macromolecular complex subunit organization 3.31E-3 8 259 3 6292
macromolecular complex assembly 4.1746E-3 8 281 3 6292
cellular macromolecule metabolic process 4.5244E-3 8 2285 7 6292
macromolecule metabolic process 5.4192E-3 8 2349 7 6292
ribosome biogenesis 7.5041E-3 8 346 3 6292
macromolecular complex subunit organization 8.1895E-3 8 357 3 6292
ribonucleoprotein complex biogenesis 9.3216E-3 8 374 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.478E-10 8 212 7 6292
structural molecule activity 9.4796E-9 8 339 7 6292
RNA binding 8.8446E-3 8 367 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle