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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 1.9994E-5 6 514 5 6292
cytosolic ribosome 7.7539E-5 6 101 3 6292
90S preribosome 1.0242E-4 6 17 2 6292
cytosolic part 1.3633E-4 6 122 3 6292
preribosome 4.1945E-4 6 34 2 6292
ribosomal subunit 4.5377E-4 6 183 3 6292
cytosolic small ribosomal subunit 5.2472E-4 6 38 2 6292
cytosol 1.644E-3 6 284 3 6292
ribosome 1.747E-3 6 290 3 6292
small nucleolar ribonucleoprotein complex 1.8804E-3 6 72 2 6292
box C/D snoRNP complex 1.9064E-3 6 2 1 6292
small ribosomal subunit 1.9326E-3 6 73 2 6292
macromolecular complex 5.5477E-3 6 1635 5 6292
non-membrane-bounded organelle 6.2191E-3 6 959 4 6292
intracellular non-membrane-bounded organelle 6.2191E-3 6 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 4.2398E-6 6 376 5 6292
regulation of translation 1.3832E-5 6 57 3 6292
maturation of SSU-rRNA 1.5357E-5 6 59 3 6292
posttranscriptional regulation of gene expression 1.6989E-5 6 61 3 6292
regulation of cellular protein metabolic process 2.3597E-5 6 68 3 6292
regulation of protein metabolic process 3.0457E-5 6 74 3 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.8841E-5 6 13 2 6292
gene expression 7.1216E-5 6 1283 6 6292
ribosome biogenesis 1.2345E-4 6 346 4 6292
rRNA processing 1.5729E-4 6 128 3 6292
ribonucleoprotein complex biogenesis 1.675E-4 6 374 4 6292
rRNA metabolic process 1.9253E-4 6 137 3 6292
ncRNA processing 7.2911E-4 6 215 3 6292
cellular protein metabolic process 7.4048E-4 6 1074 5 6292
protein metabolic process 9.7146E-4 6 1136 5 6292
ribosomal subunit assembly 1.1004E-3 6 55 2 6292
cellular macromolecule biosynthetic process 1.2008E-3 6 1187 5 6292
macromolecule biosynthetic process 1.2106E-3 6 1189 5 6292
ncRNA metabolic process 1.2291E-3 6 257 3 6292
ribosome assembly 1.4882E-3 6 64 2 6292
organelle assembly 1.7281E-3 6 69 2 6292
cellular component biogenesis 1.8339E-3 6 694 4 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
ribonucleoprotein complex assembly 3.0534E-3 6 92 2 6292
RNA processing 3.811E-3 6 380 3 6292
cellular biosynthetic process 4.5365E-3 6 1567 5 6292
biosynthetic process 5.0373E-3 6 1602 5 6292
regulation of gene expression 5.9803E-3 6 445 3 6292
regulation of macromolecule biosynthetic process 6.4094E-3 6 456 3 6292
regulation of cellular biosynthetic process 7.0671E-3 6 472 3 6292
regulation of biosynthetic process 7.1095E-3 6 473 3 6292
regulation of macromolecule metabolic process 7.7652E-3 6 488 3 6292
regulation of translational fidelity 8.5551E-3 6 9 1 6292
regulation of primary metabolic process 8.9879E-3 6 514 3 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 2.4203E-7 6 212 5 6292
structural molecule activity 2.5314E-6 6 339 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle