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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
KRE33
  • nucleolus
  • ribosome biogenesis
  • molecular_function
  • RPL15A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic large ribosomal subunit
  • ribosome
  • intracellular
  • translation
  • RNA binding
  • structural constituent of ribosome
  • RPL20B
  • ribosome biogenesis
  • translation
  • structural constituent of ribosome
  • RPS11A, RPS11B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS13
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • 90S preribosome
  • ribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS1A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • 90S preribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS4B, RPS4A
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS7A
  • small nucleolar ribonucleoprotein complex
  • translation
  • structural constituent of ribosome
  • RPS8B, RPS8A
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • 90S preribosome
  • ribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • translation
  • structural constituent of ribosome
  • UTP22
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    90S preribosome 1.8855E-11 10 17 5 6292
    preribosome 8.3832E-10 10 34 5 6292
    cytosolic small ribosomal subunit 1.5082E-9 10 38 5 6292
    cytosolic ribosome 2.9383E-9 10 101 6 6292
    cytosolic part 9.2635E-9 10 122 6 6292
    small ribosomal subunit 4.4091E-8 10 73 5 6292
    ribonucleoprotein complex 7.3162E-8 10 514 8 6292
    ribosomal subunit 1.0638E-7 10 183 6 6292
    cytosol 1.4464E-6 10 284 6 6292
    ribosome 1.6359E-6 10 290 6 6292
    non-membrane-bounded organelle 9.5787E-6 10 959 8 6292
    intracellular non-membrane-bounded organelle 9.5787E-6 10 959 8 6292
    macromolecular complex 5.4804E-4 10 1635 8 6292
    small nucleolar ribonucleoprotein complex 5.4764E-3 10 72 2 6292
    intracellular organelle part 6.1675E-3 10 2282 8 6292
    organelle part 6.1675E-3 10 2282 8 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 6.1286E-9 10 376 8 6292
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.2018E-7 10 13 3 6292
    gene expression 4.872E-6 10 1283 9 6292
    cellular protein metabolic process 2.2894E-5 10 1074 8 6292
    protein metabolic process 3.5183E-5 10 1136 8 6292
    cellular macromolecule biosynthetic process 4.9194E-5 10 1187 8 6292
    macromolecule biosynthetic process 4.9829E-5 10 1189 8 6292
    regulation of translation 8.0877E-5 10 57 3 6292
    maturation of SSU-rRNA 8.9707E-5 10 59 3 6292
    ribosome biogenesis 9.789E-5 10 346 5 6292
    posttranscriptional regulation of gene expression 9.9146E-5 10 61 3 6292
    regulation of cellular protein metabolic process 1.3725E-4 10 68 3 6292
    ribonucleoprotein complex biogenesis 1.4199E-4 10 374 5 6292
    regulation of protein metabolic process 1.7664E-4 10 74 3 6292
    cellular biosynthetic process 3.9961E-4 10 1567 8 6292
    biosynthetic process 4.7103E-4 10 1602 8 6292
    cellular macromolecule metabolic process 7.3309E-4 10 2285 9 6292
    rRNA processing 8.8893E-4 10 128 3 6292
    macromolecule metabolic process 9.2762E-4 10 2349 9 6292
    rRNA metabolic process 1.0834E-3 10 137 3 6292
    cellular component biogenesis 2.5231E-3 10 694 5 6292
    ncRNA processing 3.9518E-3 10 215 3 6292
    primary metabolic process 5.4001E-3 10 2896 9 6292
    ncRNA metabolic process 6.5282E-3 10 257 3 6292
    cellular metabolic process 7.9165E-3 10 3033 9 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 6.195E-11 10 212 8 6292
    structural molecule activity 2.6832E-9 10 339 8 6292
    rRNA binding 2.6962E-4 10 16 2 6292
    RNA binding 1.8047E-3 10 367 4 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle