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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

90S preribosome 4.1099E-5 4 17 2 6292
preribosome 1.6892E-4 4 34 2 6292
cytosolic small ribosomal subunit 2.115E-4 4 38 2 6292
small ribosomal subunit 7.8477E-4 4 73 2 6292
cytosolic ribosome 1.499E-3 4 101 2 6292
cytosolic part 2.1811E-3 4 122 2 6292
ribosomal subunit 4.8569E-3 4 183 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
rRNA processing 2.3988E-3 4 128 2 6292
rRNA metabolic process 2.7441E-3 4 137 2 6292
ncRNA processing 6.6633E-3 4 215 2 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.2408E-3 4 13 1 6292
ncRNA metabolic process 9.4419E-3 4 257 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

poly-purine tract binding 3.1756E-3 4 5 1 6292
poly(A) RNA binding 3.1756E-3 4 5 1 6292
single-stranded RNA binding 3.1756E-3 4 5 1 6292
ribonucleoprotein binding 4.4437E-3 4 7 1 6292
structural constituent of ribosome 6.4824E-3 4 212 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle