| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.07] [SVM Score: 0.453757006608] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin filament | 1.819E-6 | 2 | 9 | 2 | 6292 |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| myosin V complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| unconventional myosin complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| filamentous actin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| myosin complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum inheritance | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| endoplasmic reticulum organization | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| intracellular mRNA localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| gene conversion at mating-type locus | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| mating type switching | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| mating type determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| sex determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| cell fate commitment | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin filament binding | 3.3348E-6 | 2 | 12 | 2 | 6292 |
| actin binding | 1.0611E-5 | 2 | 21 | 2 | 6292 |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| microfilament motor activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| protein binding, bridging | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |