| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.085] [SVM Score: 0.455813591855] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| INP2 |
|
|
|
| PEX30 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| intrinsic to peroxisomal membrane | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| integral to peroxisomal membrane | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| peroxisomal membrane | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| microbody membrane | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| peroxisomal part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| peroxisome | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| integral to organelle membrane | 1.051E-4 | 2 | 65 | 2 | 6292 |
| intrinsic to organelle membrane | 1.151E-4 | 2 | 68 | 2 | 6292 |
| integral to membrane | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| intrinsic to membrane | 1.7276E-3 | 2 | 262 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peroxisome organization | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| peroxisome inheritance | 9.5344E-4 | 2 | 3 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein anchor | 1.2712E-3 | 2 | 4 | 1 | 6292 |