| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.07] [SVM Score: 0.486781249313] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid particle | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| mitochondrial outer membrane | 2.1151E-4 | 2 | 92 | 2 | 6292 |
| outer membrane | 7.9595E-4 | 2 | 178 | 2 | 6292 |
| organelle outer membrane | 7.9595E-4 | 2 | 178 | 2 | 6292 |
| mitochondrial membrane | 1.7808E-3 | 2 | 266 | 2 | 6292 |
| mitochondrial envelope | 2.4514E-3 | 2 | 312 | 2 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
| organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phosphatidic acid biosynthetic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| phosphatidic acid metabolic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cellular lipid metabolic process | 8.5067E-4 | 2 | 184 | 2 | 6292 |
| medium-chain fatty acid metabolic process | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| organic acid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| oxoacid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| carboxylic acid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| cellular ketone metabolic process | 3.0157E-3 | 2 | 346 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| acylglycerone-phosphate reductase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| alcohol O-acetyltransferase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| alcohol O-acyltransferase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| O-acetyltransferase activity | 2.859E-3 | 2 | 9 | 1 | 6292 |
| serine hydrolase activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| O-acyltransferase activity | 6.6645E-3 | 2 | 21 | 1 | 6292 |