| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.526789438552] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| SEC14 |
|
|
|
| SFH5 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytosol | 2.0305E-3 | 2 | 284 | 2 | 6292 |
| microsome | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| vesicular fraction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phospholipid transport | 3.3348E-6 | 2 | 12 | 2 | 6292 |
| lipid transport | 3.3651E-5 | 2 | 37 | 2 | 6292 |
| lipid localization | 3.744E-5 | 2 | 39 | 2 | 6292 |
| phosphatidylinositol metabolic process | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| phosphatidylcholine metabolic process | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
| ethanolamine and derivative metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| Golgi to plasma membrane transport | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phosphatidylinositol transporter activity | 5.0527E-7 | 2 | 5 | 2 | 6292 |
| phospholipid transporter activity | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| lipid transporter activity | 8.6401E-6 | 2 | 19 | 2 | 6292 |
| substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
| transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |