| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.552013371512] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ATG11 |
|
|
|
| ATG2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| extrinsic to membrane | 6.4422E-5 | 2 | 51 | 2 | 6292 |
| pre-autophagosomal structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peroxisome degradation | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| peroxisome organization | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| autophagy | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| protein targeting to vacuole | 1.1854E-4 | 2 | 69 | 2 | 6292 |
| vacuolar transport | 3.312E-4 | 2 | 115 | 2 | 6292 |
| protein targeting | 1.3892E-3 | 2 | 235 | 2 | 6292 |
| intracellular protein transport | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| protein transport | 1.8213E-3 | 2 | 269 | 2 | 6292 |
| establishment of protein localization | 1.8485E-3 | 2 | 271 | 2 | 6292 |
| cellular protein localization | 1.8898E-3 | 2 | 274 | 2 | 6292 |
| cellular macromolecule localization | 2.0305E-3 | 2 | 284 | 2 | 6292 |
| protein localization | 2.3118E-3 | 2 | 303 | 2 | 6292 |
| macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
| cellular catabolic process | 4.3405E-3 | 2 | 415 | 2 | 6292 |
| catabolic process | 6.2027E-3 | 2 | 496 | 2 | 6292 |
| intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
| establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |