From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.605508502605] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
HSP78 |
|
|
|
MSP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
protein localization in mitochondrion | 6.9626E-5 | 2 | 53 | 2 | 6292 |
protein targeting to mitochondrion | 6.9626E-5 | 2 | 53 | 2 | 6292 |
mitochondrial transport | 1.0838E-4 | 2 | 66 | 2 | 6292 |
protein import | 2.9194E-4 | 2 | 108 | 2 | 6292 |
protein localization in organelle | 5.5711E-4 | 2 | 149 | 2 | 6292 |
mitochondrion organization | 6.1087E-4 | 2 | 156 | 2 | 6292 |
protein targeting | 1.3892E-3 | 2 | 235 | 2 | 6292 |
intracellular protein transport | 1.6363E-3 | 2 | 255 | 2 | 6292 |
protein transport | 1.8213E-3 | 2 | 269 | 2 | 6292 |
establishment of protein localization | 1.8485E-3 | 2 | 271 | 2 | 6292 |
cellular protein localization | 1.8898E-3 | 2 | 274 | 2 | 6292 |
cellular macromolecule localization | 2.0305E-3 | 2 | 284 | 2 | 6292 |
protein localization | 2.3118E-3 | 2 | 303 | 2 | 6292 |
macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
protein import into mitochondrial matrix | 7.2981E-3 | 2 | 23 | 1 | 6292 |
intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ATPase activity | 1.1194E-3 | 2 | 211 | 2 | 6292 |
nucleoside-triphosphatase activity | 2.7262E-3 | 2 | 329 | 2 | 6292 |
hydrolase activity, acting on acid anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
pyrophosphatase activity | 3.1391E-3 | 2 | 353 | 2 | 6292 |