| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.655954512955] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ABF2 |
|
|
|
| YHM2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleoid | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| mitochondrial nucleoid | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| mitochondrial chromosome | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| cytoplasmic chromosome | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| mitochondrial matrix | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| mitochondrial lumen | 7.7811E-4 | 2 | 176 | 2 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial genome maintenance | 2.8346E-5 | 2 | 34 | 2 | 6292 |
| mitochondrion organization | 6.1087E-4 | 2 | 156 | 2 | 6292 |
| tricarboxylic acid transport | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| tricarboxylate secondary active transmembrane transporter activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| DNA binding | 1.6492E-3 | 2 | 256 | 2 | 6292 |
| DNA bending activity | 4.1283E-3 | 2 | 13 | 1 | 6292 |
| secondary active transmembrane transporter activity | 8.248E-3 | 2 | 26 | 1 | 6292 |