| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.037] [SVM Score: 0.665470175789] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| AIP1 |
|
|
|
| HSK3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| DASH complex | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin filament depolymerization | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
| actin polymerization or depolymerization | 2.859E-3 | 2 | 9 | 1 | 6292 |
| protein depolymerization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| regulation of microtubule cytoskeleton organization | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| regulation of microtubule polymerization or depolymerization | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| regulation of microtubule-based process | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| microtubule polymerization or depolymerization | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| regulation of cytoskeleton organization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| mitotic spindle organization in nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |