A genomewide screen for petite-negative yeast strains yields a new subunit of the i-AAA protease complex

Mol Biol Cell. 2006 Jan;17(1):213-26. doi: 10.1091/mbc.e05-06-0585. Epub 2005 Nov 2.

Abstract

Unlike many other organisms, the yeast Saccharomyces cerevisiae can tolerate the loss of mitochondrial DNA (mtDNA). Although a few proteins have been identified that are required for yeast cell viability without mtDNA, the mechanism of mtDNA-independent growth is not completely understood. To probe the relationship between the mitochondrial genome and cell viability, we conducted a microarray-based, genomewide screen for mitochondrial DNA-dependent yeast mutants. Among the several genes that we discovered is MGR1, which encodes a novel subunit of the i-AAA protease complex located in the mitochondrial inner membrane. mgr1Delta mutants retain some i-AAA protease activity, yet mitochondria lacking Mgr1p contain a misassembled i-AAA protease and are defective for turnover of mitochondrial inner membrane proteins. Our results highlight the importance of the i-AAA complex and proteolysis at the inner membrane in cells lacking mitochondrial DNA.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • ATP-Dependent Proteases
  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / metabolism
  • DNA, Mitochondrial / genetics
  • Genetic Testing
  • Genome, Fungal / genetics*
  • Metalloendopeptidases / chemistry*
  • Metalloendopeptidases / genetics
  • Metalloendopeptidases / metabolism*
  • Mitochondrial Proteins / genetics
  • Mitochondrial Proteins / metabolism
  • Mutation / genetics
  • Phenotype
  • Protein Binding
  • Protein Subunits / genetics
  • Protein Subunits / metabolism
  • Saccharomyces cerevisiae / classification
  • Saccharomyces cerevisiae / enzymology
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism

Substances

  • DNA, Mitochondrial
  • Mitochondrial Proteins
  • Protein Subunits
  • Saccharomyces cerevisiae Proteins
  • ATP-Dependent Proteases
  • YME1 protein, S cerevisiae
  • Metalloendopeptidases
  • intermembrane space AAA protease-1
  • Adenosine Triphosphatases