Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps

EMBO J. 2001 Nov 15;20(22):6475-84. doi: 10.1093/emboj/20.22.6475.

Abstract

Eukaryotic ribosome maturation depends on a set of well ordered processing steps. Here we describe the functional characterization of yeast Nog2p (Ynr053cp), a highly conserved nuclear protein. Nog2p contains a putative GTP-binding site, which is essential in vivo. Kinetic and steady-state measurements of the levels of pre-rRNAs in Nog2p-depleted cells showed a defect in 5.8S and 25S maturation and a concomitant increase in the levels of both 27SB(S) and 7S(S) precursors. We found Nog2p physically associated with large pre-60S complexes highly enriched in the 27SB and 7S rRNA precursors. These complexes contained, besides a subset of ribosomal proteins, at least two additional factors, Nog1p, another putative GTP-binding protein, and Rlp24p (Ylr009wp), which belongs to the Rpl24e family of archaeal and eukaryotic ribosomal proteins. In the absence of Nog2p, the pre-60S ribosomal complexes left the nucleolus, but were retained in the nucleoplasm. These results suggest that transient, possibly GTP-dependent association of Nog2p with the pre-ribosomes might trigger late rRNA maturation steps in ribosomal large subunit biogenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Alternative Splicing
  • Amino Acid Sequence
  • Binding Sites
  • Blotting, Northern
  • Cell Nucleolus / metabolism
  • Cell Nucleus / metabolism
  • Cytoplasm / metabolism
  • DNA, Complementary / metabolism
  • GTP Phosphohydrolases / chemistry
  • GTP Phosphohydrolases / genetics*
  • GTP Phosphohydrolases / metabolism*
  • GTP-Binding Proteins / metabolism
  • Genotype
  • Glucose / metabolism
  • Green Fluorescent Proteins
  • Humans
  • In Situ Hybridization
  • Kinetics
  • Luminescent Proteins / metabolism
  • Mass Spectrometry
  • Microscopy, Electron
  • Microscopy, Fluorescence
  • Models, Genetic
  • Molecular Sequence Data
  • Plasmids / metabolism
  • Polyribosomes / metabolism
  • Promoter Regions, Genetic
  • Protein Binding
  • RNA / metabolism
  • RNA, Messenger / metabolism
  • RNA, Ribosomal / metabolism
  • Ribosomes / chemistry*
  • Ribosomes / metabolism*
  • Sequence Homology, Amino Acid
  • Time Factors

Substances

  • DNA, Complementary
  • Luminescent Proteins
  • RNA, Messenger
  • RNA, Ribosomal
  • Green Fluorescent Proteins
  • RNA
  • GTP Phosphohydrolases
  • GTP-Binding Proteins
  • Glucose